BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A07SP1|AL427242
(975 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig762 1839 0.0
>3x_Contig762
Length = 2085
Score = 1839 bits (925), Expect = 0.0
Identities = 952/961 (99%), Gaps = 4/961 (0%)
Strand = Plus / Plus
Query: 2 gatccagcccatctagaaaaaattcaggagtaaataaatatttgggataaaaacaacgtt 61
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1125 gatccagcccatctagaaaaaattcaggagttaataaatatttgggataaaaacaacgtt 1184
Query: 62 tttaacaacaaacctttgaatgcagcaaggagtcgtttgagtgaacttgtaaatagcaac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 tttaacaacaaacctttgaatgcagcaaggagtcgtttgagtgaacttgtaaatagcaac 1244
Query: 122 tcgatccctccatcttcgtcatctaattcgtctttaaccccacgcccagctcccagtaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 tcgatccctccatcttcgtcatctaattcgtctttaaccccacgcccagctcccagtaat 1304
Query: 182 gataataagtcctcctcaggtagtaaaattgatcaagtcttgaacgctataccgaaattc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 gataataagtcctcctcaggtagtaaaattgatcaagtcttgaacgctataccgaaattc 1364
Query: 242 gaaaaccttcctggcatacaagtcccgtctggtttattttcagaggacatatcggtacag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 gaaaaccttcctggcatacaagtcccgtctggtttattttcagaggacatatcggtacag 1424
Query: 302 gactcttgtttgaragaacttctaggaaagttgcaagttgaactgacaaagaaccaaaaa 361
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1425 gactcttgtttgaaagaacttctaggaaagttgcaagttgaactgacaaagaaccaaaaa 1484
Query: 362 ttggttcaagtaaacaaacaggctcctcgctcgatagataattctacctcttctacctct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 ttggttcaagtaaacaaacaggctcctcgctcgatagataattctacctcttctacctct 1544
Query: 422 tcatcgtcaaggtctactcgctcaacgcagtacgttggaagagactccagaaatgacaga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1545 tcatcgtcaaggtctactcgctcaacgcagtacgttggaagagactccagaaatgacaga 1604
Query: 482 tctagatcacccccaagaaacaaaaatgacagatctcgagcacaggcaacaacttctctg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1605 tctagatcacccccaagaaacaaaaatgacagatctcgagcacaggcaacaacttctctg 1664
Query: 542 catttatctaggcaacagcag---caacaacaacaacaacaacaacaacagcagcagtta 598
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 1665 catttatctaggcaacagcagcaacaacaacaacaacaacaacaacaacagcagcagtca 1724
Query: 599 attaatggtcaacaaggaaataaccatcatttgtacccagatgagcagaatgttccctca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1725 attaatggtcaacaaggaaataaccatcatttgtacccagatgagcagaatgttccctca 1784
Query: 659 aaccctcattttaggccaaarccggtatcctttgatccaactgtgccaagggaccacgta 718
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1785 aaccctcattttaggccaaaaccggtatcctttgatccaactgtgccaagggaccacgta 1844
Query: 719 aaagtatattccagaacccttttcgttggtggtgt-ccacaaaatttcaaagaacatgat 777
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1845 aaagtatattccagaacccttttcgttggtggtgtcccacaaaatttcaaagaacatgat 1904
Query: 778 attgcaagaatgttaagacaattcggtgaggttcagagtgttattttgaataatgcccgt 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1905 attgcaagaatgttaagacaattcggtgaggttcagagtgttattttgaataatgcccgt 1964
Query: 838 wagcacgcctttgtgaaagtctattcaagagcagaagcggagaggatcatggcgcatttc 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1965 aagcacgcctttgtgaaagtctattcaagagcagaagcggagaggatcatggcgcatttc 2024
Query: 898 actggtggtggcaatccgacacatggtttgagaatccgttgggccgttggtttcggtcct 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 actggtggtggcaatccgacacatggtttgagaatccgttgggccgttggtttcggtcct 2084
Query: 958 a 958
|
Sbjct: 2085 a 2085
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9234
Number of Sequences: 1807
Number of extensions: 9234
Number of successful extensions: 878
Number of sequences better than 1.0e-20: 1
length of query: 975
length of database: 10,358,551
effective HSP length: 16
effective length of query: 959
effective length of database: 10,329,639
effective search space: 9906123801
effective search space used: 9906123801
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)